Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs73818943 chr4:12583894 G/A 4.82E-5 258 33.47 27.15 15.68 KM Plot
SARC rs738293 chr22:36937543 C/A 1.68E-5 255 31.97 35.72 18.28 KM Plot
SARC rs74023935 chr15:75359184 T/C 1.79E-5 251 33.2 30.3 8.87 KM Plot
SARC rs74338073 chr17:48161519 A/C 2.52E-5 247 31.27 33.08 9.27 KM Plot
SARC rs74352134 chr3:159810755 G/A 1.6E-12 258 32.3 30.3 3.1 KM Plot
SARC rs74459344 chr3:53099595 A/G 0 253 31.93 27.1 2.13 KM Plot
SARC rs74623761 chr8:129363670 A/G 2.22E-13 256 33.9 19.62 3.97 KM Plot
SARC rs74915383 chr7:164835 G/C 0 249 33.2 29.87 0.73 KM Plot
SARC rs7500138 chr16:8951920 C/T 5.8E-5 253 34.97 22.93 4.63 KM Plot
SARC rs75138766 chr5:217248 C/A 5.83E-7 253 33.95 29.37 9.08 KM Plot
SARC rs75203758 chr12:26078130 G/A 2.76E-6 256 33.2 28.8 16.17 KM Plot
SARC rs75217232 chr3:53132373 A/C 0 250 32.88 27.12 2.13 KM Plot
SARC rs75365400 chr8:129445440 T/C 1.98E-13 257 33.83 23.17 3.97 KM Plot
SARC rs75689778 chr8:129431182 T/A 1.97E-13 257 33.95 23.17 3.97 KM Plot
SARC rs75730259 chr3:159805930 T/C 2.03E-12 258 32.13 30.73 3.1 KM Plot